Generation of Expressed Sequence Tags and development of microsatellite markers for Castanopsis sieboldii var. sieboldii (Fagaceae)
نویسندگان
چکیده
منابع مشابه
Development and characterization of polymorphic microsatellite markers for Castanopsis hystrix (Fagaceae).
Castanopsis hystrix is one of the most important and dominant species in evergreen broad-leaved forests in subtropical China. However, the population of this species undergone severe decline because of deforestation over the past 2 decades. For both conservation and forestry management, it is essential to develop molecular markers for C. hystrix. We identified 11 microsatellite loci in 2 wild p...
متن کاملDevelopment of polymorphic microsatellite markers based on expressed sequence tags in Populus cathayana (Salicaceae).
Populus cathayana occupies a large area within the northern, central, and southwestern regions of China, and is considered to be an important reforestation species in western China. In order to investigate the population genetic structure of this species, 10 polymorphic microsatellite loci were identified based on expressed sequence tags from de novo sequencing on the Illumina HiSeq 2000 platfo...
متن کاملDevelopment of microsatellite markers based on expressed sequence tags in Asparagus cochinchinensis (Asparagaceae)1
PREMISE OF THE STUDY Transcriptome-derived simple sequence repeat (SSR) markers were developed in Asparagus cochinchinensis (Asparagaceae). Due to its application in traditional medicine, its wild populations are threatened by over-collection even in protected areas, requiring immediate conservation efforts. METHODS AND RESULTS Based on transcriptome data of A. cochinchinensis, 96 primer pair...
متن کاملIsolation and characterization of microsatellite loci for Smilax sieboldii (Smilacaceae)1
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC-BY-NC-SA 4.0), which permits unrestricted noncommercial use and redistribution provided that the original author and source are credited and the new work is distributed under the same license as the original. The Smilax hispida group is a well-supported clade including six species in Smila...
متن کاملDevelopment of Microsatellite Markers Derived from Expressed Sequence Tags of Polyporales for Genetic Diversity Analysis of Endangered Polyporus umbellatus
A large scale of EST sequences of Polyporales was screened in this investigation in order to identify EST-SSR markers for various applications. The distribution of EST sequences and SSRs in five families of Polyporales was analyzed, respectively. Mononucleotide was the most abundant type, followed by trinucleotide. Among five families, Ganodermataceae occupied the most SSR markers, followed by ...
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ژورنال
عنوان ژورنال: Annals of Forest Science
سال: 2009
ISSN: 1286-4560,1297-966X
DOI: 10.1051/forest/2009037